Free Access
Volume 66, Number 2, March-April 2011
Page(s) 79 - 89
Published online 28 March 2011
  1. Peres B., Barlet N., Loiseau G., Montet D., Review of the current methods of analytical traceability allowing determination of the origin of foodstuffs, Food Contr. 18 (2007) 228–235. [CrossRef] [Google Scholar]
  2. El Sheikha A.F., Technological, chemical and microbiological studies on some packed foods, Fac. Agric., Minufiya Univ., Master Sci., Shibin El Kom, Egypt, 2004, 174 p. [Google Scholar]
  3. El Sheikha A.F., Larroque M., Reynes M., Montet D., Quality of Physalis (Physalis pubescens L.) juice packed in glass bottles and flexible laminated packs during storage at 5°C, Afr. J. Food Agric. Nutr. Dev. 9 (6) (2009) 1388–1405, available at [Google Scholar]
  4. Novoa R.H., Bojacá M., Galvis J.A., Fischer G., La madurez del fruto y el secado del cáliz influyen en el comportamiento poscosecha de la uchuva (Physalis peruviana L.) almacenada a 12 °C, Agron. Colomb. 24 (1) (2006) 68–76. [Google Scholar]
  5. Sodeko O.O., Izuagbe Y.S., Ukhun M.E., Effect of different preservative treatment on the microbial population of Nigerian orange juice, Microbios 51 (1987) 133–143. [PubMed] [Google Scholar]
  6. Ercolini D., PCR-DGGE fingerprinting: novel strategies for detection of microbes in food, J. Microbiol. Methods 56 (2004) 297–314. [CrossRef] [PubMed] [Google Scholar]
  7. Nielsen E.N., Emgberg J., Fussing V., Petersen L., Brogren C.H., On S.L., Evaluation of phenotypic and genotypic methods for subtyping Campylobacter jejuni isolates from humans, poultry, and cattle, J. Clin. Microbiol. 38 (2000) 3800–3810. [PubMed] [Google Scholar]
  8. Theelen B., Silvestri M., Gueho E., vanBelkum A., Boekhout T., Identification and typing of Malassezia yeasts using amplified fragment length polymorphisms (AFLP), random amplified polymorphic DNA (RAPD) and denaturing gradient gel electrophoresis (DGGE), FEMS Yeast Res. 1 (2001) 79–86. [CrossRef] [PubMed] [Google Scholar]
  9. Gurtler V., Garrie H.D., Mayall B.C., Denaturing gradient gel electrophoretic multilocus sequence typing of Staphylococcus aureus isolates, Electrophoresis 23 (2002) 3310–3320. [CrossRef] [PubMed] [Google Scholar]
  10. Muyzer G., De Waal E.C., Uitterlinden A.G., Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA, Appl. Environ. Microbiol. 5 (1993) 695–700. [Google Scholar]
  11. Montet D., Leesing R., Gemrot F., Loiseau G., Development of an efficient method for bacterial diversity analysis: Denaturing Gradient Gel Electrophoresis (DGGE), in: Semin. Food Saf. Int. Trade, Bangkok, Thailand, 2004. [Google Scholar]
  12. Le Nguyen D.D., Ha H., Dijoux D., Loiseau G., Montet D., Determination of fish origin by using 16S rDNA fingerprinting of bacterial communities by PCR-DGGE: An application on Pangasius fish from Vietnam, Food Control 19 (5) (2008) 454–460. [CrossRef] [Google Scholar]
  13. Montet D., Le Nguyen D.D., El Sheikha A.F., Condur A., Métayer I., Loiseau G., Application PCR-DGGE in determining food origin: Cases studies of fish and fruits, in: Glass R., Martindale W. (Eds.), Int. Conf. Traceability: tracking and tracing in the food chain, Sand Hutton York, U.K., Asp. Appl. Biol. 87 (2008) 11–22. [Google Scholar]
  14. El Sheikha A.F., Condur A., Métayer I., Le Nguyen D.D., Loiseau G., Montet D., Determination of fruit origin by using 26S rDNA fingerprinting of yeast communities by PCR-DGGE: preliminary application to Physalis fruits from Egypt, Yeast 26 (10) (2009) 567–573. [CrossRef] [PubMed] [Google Scholar]
  15. Karakousis A., Tan L., Ellis D., Alexiou H., Wormald P.J., An assessment of the efficiency of fungal DNA extraction methods for maximizing the detection of medically important fungi using PCR, J. Microbiol. Methods 65 (2006) 38–48. [CrossRef] [PubMed] [Google Scholar]
  16. Sandhu G.S., Kline B.C., Stockman L., Roberts G.D., Molecular probes for diagnosis of fungal infections, Clin. Microbiol. 33 (11) (1995) 2913–2919. [Google Scholar]
  17. Wu Z., Wang X.R., Blomquist G., Evaluation of PCR primers and PCR conditions for specific detection of common airborne fungi, J. Environ. Monit. 4 (2002) 377–382. [CrossRef] [PubMed] [Google Scholar]
  18. Li X., Zhang H., Wu M., Zhang Y., Zhang C., Effect of methamidophos on soil fungi community in microcosms by plate count, DGGE and clone library analysis, J. Environ. Sci. 20 (2008) 619–625. [CrossRef] [Google Scholar]
  19. Sheffield V.C., Beck J.S., Stone E.M., Myers R.M., Attachment of a 40 bp G + C rich sequence (GC-clamp) to genomic DNA fragments by polymerase chain reaction results in improved detection of single-base changes, Proc. Natl. Acad. Sci. U.S.A. 86 (1989) 232–236. [CrossRef] [PubMed] [Google Scholar]
  20. Van Hannen E.J., Zwart G., Van Agterveld M.P., Gons H.J., Ebert J., Laanbroek H.J., Changes in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with viruses, Appl. Environ. Microbiol. 65 (1999) 795–801. [PubMed] [Google Scholar]
  21. Muyzer G., Teske A., Wirsen C.O., Jannasch H.W., Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent sample by denaturing gradient gel electrophoresis of 16S rDNA fragment, Arch. Microbiol. 164 (1995) 165–172. [CrossRef] [PubMed] [Google Scholar]
  22. Kowalchuk G.A., Stephen J.R., De Boer W., Prosser J.I., Embley T.M., Woldendorp J.W., Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR amplified 16S ribosomal DNA fragments, Appl. Environ. Microbiol. 63 (1997) 1489–1497. [PubMed] [Google Scholar]
  23. Heyndrickx M., Vauterin L., Vandamme P., Kersters K., De Vos P., Applicability of combined amplified ribosomal DNA restriction analysis (ARDRA) patterns in bacterial phylogeny and taxonomy, J. Microbiol. Methods 26 (1996) 247–259. [CrossRef] [Google Scholar]
  24. El Sheikha A.F., Métayer I., Montet D., A biological bar-code for determining the geographical origin of fruit by using 28S rDNA fingerprinting of fungi communities by PCR-DGGE: an application to Physalis fruits from Egypt, Food Biotechnol. 25 (2) (2011) (Accepted). [Google Scholar]
  25. Osborn A.M., Smith C.J., DNA fingerprinting of microbial communities, in: Owen E. (Ed.), Molecular microbial ecology, Cromwell Press, Trowbridge, Wilts, U.K., 2005, pp. 72–74. [Google Scholar]
  26. Ghidini S., Ianieri A., Zanardi E., Conter M., Boschetti T., Iacumin P., Bracchi P.G., Stable isotopes determination in food authentication: a review, Ann. Fac. Med. Vet. Univ. Di Parma Vol. XXVI (2006) 193–204. [Google Scholar]
  27. Ben Omar N., Ampe F., Microbial community dynamics during production of the Mexican fermented maize dough pozol, Appl. Environ. Microbiol. 66 (2000) 3664–3673. [CrossRef] [PubMed] [Google Scholar]
  28. Ampe F., Sirvent A., Zakhia N., Dynamics of the microbial community responsible for traditional sour cassava starch fermentation studied by denaturing gradient gel electrophoresis and quantitative rRNA hybridization, Int. J. Food Microbiol. 65 (2001) 45–54. [CrossRef] [PubMed] [Google Scholar]
  29. Röling W.F.M., Kerler J., Braster M., Apriyantono A., Stam H., van Verseveld H.W., Microorganisms with a taste for vanilla: microbial ecology of traditional Indonesian vanilla curing, Appl. Environ. Microbiol. 67 (2001) 1995–2003. [CrossRef] [PubMed] [Google Scholar]
  30. Flórez A., Mayo B., Fungal diversity and succession during the manufacture and ripening of traditional, Spanish, blue-veined Cabrales cheese, as determined by PCR-DGGE, Int. J. Food Microbiol. 10 (2006) 165–171. [CrossRef] [Google Scholar]
  31. Le Nguyen D.D., Gemrot E., Loiseau G., Montet D., Determination of citrus fruit origin by using 16S rDNA fingerprinting of bacterial communities by PCR-DGGE: an application on Clementine from Morocco and Spain, Fruits 63 (2008) 3–9. [CrossRef] [EDP Sciences] [Google Scholar]